OK I checked all the traces around the battery and they checkout fine with the continuity test. I scraped a few dark traces and ran solder over them for good measure. I pretty convinced that around that area is fine.
The Cart Slot 1 looks good also and I have cleaned that.
I think its chip related, I looked in other posts and someone mentioned the 2 bad 74LS245 latches on bottom board. Are they the connectors or the chips next to connector?